Sourdough Discard Molasses Cookie Recipe with Fresh Milled Flour

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I love finding creative ways to use up my sourdough discard, especially during the holiday season. This whole grain molasses cookie recipe is the perfect solution!

plate of Molasses Cookies front view up close

The tangy flavor of the sourdough pairs beautifully with the rich molasses and cozy spices. You’ll have soft, chewy cookies that are sure to become a new family favorite and might even score you some points at a cookie exchange.

Baking desserts with sourdough and whole grains just makes me feel better about eating sweets knowing we are at least getting some good digestion and beneficial vitamins.

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Tools You’ll Need to Make Molasses Cookies

Sourdough Whole Grain Molasses Cookies Pinterest Image

Ingredients for Molasses Cookies:

  • 3 Cups (575g) Soft Wheat Berries (or bagged whole wheat)
  • 1 Cup Unsalted Butter, Softened
  • 1.5 Cups (260g) Brown Sugar
  • 2 Eggs
  • 1/2 Cup Molasses
  • 1/2 tsp Vanilla Extract
  • 1/2 Cup (130g) Sourdough Discard
  • 1/2 tsp Salt
  • 2 tsp Baking Soda
  • 2 tsp Baking Powder
  • 2 tsp Cinnamon
  • 2 tsp Ginger
  • 1/2 tsp Cloves
  • 1/4 Cup Sugar, reserved for rolling dough balls

Instructions:

  1. In a large bowl, cream together the softened butter and brown sugar using a hand mixer or stand mixer for 2-3 minutes, or until light and fluffy
  2. Add the molasses, eggs, discard, and vanilla to the butter mixture and mix until well combined
  3. Mill wheat berries into mixing bowl
  4. Add salt, baking soda, baking powder, salt, and spices to mixing bowl and mix until dough is formed
  5. Cover and refrigerate dough for 1-2 hours
  6. When ready to bake, preheat oven to 350 degrees
  7. Shape dough into smooth balls, about 1 in size, and roll in sugar
  8. Place dough balls about 2-3 inches apart on the prepared baking sheets
  9. Bake 10-13 minutes, or until tops of cookies are cracked and look set, don’t overbake
  10. Remove from oven and let rest on the pan for a couple minutes, then move to cooling rack
  11. Store cooled cookies in airtight container for 5-7 days

Notes:

  • Store dough in fridge between batches, while baking
  • You can use this recipe with all-purpose or gluten free flour, but you may need to adjust the amount of flour you use
  • You can freeze the dough balls and remove as needed for cooking, adding a couple minutes to the baking time
  • Store baked cookies in the freezer for 2-3 months
  • Makes about 36 cookies
butter and brown sugar in a stand mixer with paddle

In a large bowl, add softened butter and brown sugar.

butter and brown sugar creamed together

Cream together the softened butter and brown sugar using a hand mixer or stand mixer for 2-3 minutes, or until light and fluffy.

molasses sourdough and eggs added to creamed butter and sugar in a mixer

Add the molasses, eggs, discard, and vanilla to the butter mixture.

wet ingredients mixed together for molasses cookies

Mix until well combined. It will look a little grainy, don’t worry.

Mill wheat berries into mixing bowl.

dry ingredients in a bowl

Add salt, baking soda, baking powder, salt, and spices to mixing bowl.

Sourdough Whole Grain Molasses Cookie dough

Mix until dough is formed. Cover and refrigerate dough for 1-2 hours. Chilling the dough helps the flour to hydrate fully and to prevent too much spreading.

Molasses Cookie dough balls

When ready to bake, preheat oven to 350 degrees. Shape dough into smooth balls, about 1 in size.

Molasses Cookie dough balls coated in sugar

Roll dough balls in 1/4 cup reserved sugar.

Molasses Cookie dough balls on silicone baking mat on a baking tray

Place dough balls about 2-3 inches apart on the prepared baking sheets.

Baked Molasses Cookies

Bake 10-13 minutes, or until tops of cookies are cracked and look set, don’t overbake.

Plate of Molasses Cookie top view

Remove from oven and let rest on the pan for a couple minutes, then move to cooling rack. Store cooled cookies in airtight container for 5-7 days.

Enjoy these delightfully chewy, spiced sourdough discard molasses cookies this holiday season! The perfect snack for gatherings, cookie exchanges, or an afternoon treat with a cup of tea.

Let us know if you try our sourdough molasses cookie recipe, or if you have any other fun ways to use your sourdough discard in cookies. Try our Sourdough Chocolate Chip Cookies or Snickerdoodles for other fun cookie recipes.

Molasses Cookies Featured Image

Sourdough Whole Grain Molasses Cookies

Yield: 36 cookies
Prep Time: 1 hour
Cook Time: 12 minutes
Total Time: 1 hour 12 minutes

Use your sourdough discard in these soft, chewy, and flavorful whole grain molasses cookies - the perfect Christmas cookie.

Ingredients

  • 3 Cups (575g) Soft Wheat Berries (or bagged whole wheat)
  • 1 Cup Unsalted Butter, Softened
  • 1.5 Cups (260g) Brown Sugar
  • 2 Eggs
  • 1/2 Cup Molasses
  • 1/2 tsp Vanilla Extract
  • 1/2 Cup (130g) Sourdough Discard
  • 1/2 tsp Salt
  • 2 tsp Baking Soda
  • 2 tsp Baking Powder
  • 2 tsp Cinnamon
  • 2 tsp Ginger
  • 1/2 tsp Cloves
  • 1/4 Cup Sugar, reserved for rolling dough balls

Instructions

  1. In a large bowl, cream together the softened butter and brown sugar using a hand mixer or stand mixer for 2-3 minutes, or until light and fluffy
  2. Add the molasses, eggs, discard, and vanilla to the butter mixture and mix until well combined
  3. Mill wheat berries into mixing bowl
  4. Add salt, baking soda, baking powder, salt, and spices to mixing bowl and mix until dough is formed
  5. Cover and refrigerate dough for 1-2 hours
  6. When ready to bake, preheat oven to 350 degrees
  7. Shape dough into smooth balls, about 1 in size, and roll in sugar
  8. Place dough balls about 2-3 inches apart on the prepared baking sheets
  9. Bake 10-13 minutes, or until tops of cookies are cracked and look set, don't overbake
  10. Remove from oven and let rest on the pan for a couple minutes, then move to cooling rack
  11. Store cooled cookies in airtight container for 5-7 days

Notes

Store dough in fridge between batches, while baking

You can use this recipe with all-purpose or gluten free flour, but you may need to adjust the amount of flour you use

You can freeze the dough balls and remove as needed for cooking, adding a couple minutes to the baking time

Store baked cookies in the freezer for 2-3 months

Nutrition Information
Yield 36 Serving Size 1 cookie
Amount Per Serving Calories 110Total Fat 7gSaturated Fat 4gTrans Fat 0gUnsaturated Fat 3gCholesterol 24mgSodium 162mgCarbohydrates 11gFiber 1gSugar 5gProtein 1g

*this has not been evaluated by the FDA

FAQs

Can I use regular or gluten free flour?

Yes, you should be able to substitute, although you may need to adjust the amount of flour so only add a little at a time, watching the texture of the dough.

Can I freeze molasses cookies?

Yes, you can freeze the dough balls or the baked cookies.

Does this dough need to be refrigerated before baking?

Yes, refrigerating the dough helps the flour to hydrate fully and to prevent too much spreading.

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